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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0132540

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0132540
Locus	HORVU.MOREX.r2.2HG0132540.1
URL	Gene Ontology GO:0004012 [ Show all 13 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 16 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Phospholipid-transporting ATPase GO:0140326; molecular_function; ATPase-coupled intramembrane lipid transporter activity The GO term GO:0004012 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0140326 GO:0000166; molecular_function; nucleotide binding GO:0000287; molecular_function; magnesium ion binding GO:0005524; molecular_function; ATP binding GO:0005768; cellular_component; endosome GO:0005794; cellular_component; Golgi apparatus GO:0005802; cellular_component; trans-Golgi network GO:0009506; cellular_component; plasmodesma GO:0015914; biological_process; phospholipid transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016787; molecular_function; hydrolase activity GO:0045332; biological_process; phospholipid translocation
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0132540.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)