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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0136560

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0136560
Locus	HORVU.MOREX.r2.2HG0136560.1
URL	Gene Ontology GO:0003677 [ Show all 15 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 17 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Cytochrome P450 GO:0003677; molecular_function; DNA binding GO:0005515; molecular_function; protein binding GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0016032; biological_process; viral process GO:0017124; molecular_function; SH3 domain binding GO:0030430; cellular_component; host cell cytoplasm GO:0039593; biological_process; suppression by virus of host exit from mitosis GO:0039645; biological_process; modulation by virus of host G1/S transition checkpoint GO:0039646; biological_process; modulation by virus of host G0/G1 transition checkpoint GO:0039652; biological_process; activation by virus of host NF-kappaB transcription factor activity GO:0042025; cellular_component; host cell nucleus GO:0045893; biological_process; positive regulation of transcription, DNA-templated GO:0046872; molecular_function; metal ion binding GO:0060153; biological_process; modulation by virus of host cell cycle
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0136560.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)