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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0144240

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0144240
Locus	HORVU.MOREX.r2.2HG0144240.1
URL	Gene Ontology GO:0000122 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: ATP-dependent 6-phosphofructokinase GO:0000122; biological_process; negative regulation of transcription by RNA polymerase II GO:0003682; molecular_function; chromatin binding GO:0003727; molecular_function; single-stranded RNA binding GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0006325; biological_process; chromatin organization GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0016604; cellular_component; nuclear body GO:0016607; cellular_component; nuclear speck GO:0016740; molecular_function; transferase activity GO:0016925; biological_process; protein sumoylation GO:0019789; molecular_function; SUMO transferase activity GO:0019899; molecular_function; enzyme binding GO:0031519; cellular_component; PcG protein complex GO:0032183; molecular_function; SUMO binding GO:0035064; molecular_function; methylated histone binding GO:0035102; cellular_component; PRC1 complex GO:0044212; molecular_function; transcription regulatory region DNA binding GO:0045892; biological_process; negative regulation of transcription, DNA-templated GO:0051219; molecular_function; phosphoprotein binding
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0144240.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)