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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0148360

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0148360
Locus	HORVU.MOREX.r2.2HG0148360.1
URL	Gene Ontology GO:0000166 [ Show all 31 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 33 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Receptor-like kinase GO:0000166; molecular_function; nucleotide binding GO:0001676; biological_process; long-chain fatty acid metabolic process GO:0003824; molecular_function; catalytic activity GO:0004467; molecular_function; long-chain fatty acid-CoA ligase activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005739; cellular_component; mitochondrion GO:0005741; cellular_component; mitochondrial outer membrane GO:0005777; cellular_component; peroxisome GO:0005778; cellular_component; peroxisomal membrane GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0006629; biological_process; lipid metabolic process GO:0006631; biological_process; fatty acid metabolic process GO:0006641; biological_process; triglyceride metabolic process GO:0007405; biological_process; neuroblast proliferation GO:0008152; biological_process; metabolic process GO:0008654; biological_process; phospholipid biosynthetic process GO:0010747; biological_process; positive regulation of long-chain fatty acid import across plasma membrane GO:0010867; biological_process; positive regulation of triglyceride biosynthetic process GO:0010976; biological_process; positive regulation of neuron projection development GO:0015908; biological_process; fatty acid transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016874; molecular_function; ligase activity GO:0019899; molecular_function; enzyme binding GO:0031090; cellular_component; organelle membrane GO:0042803; molecular_function; protein homodimerization activity GO:0043231; cellular_component; intracellular membrane-bounded organelle GO:0102391; molecular_function; decanoate-CoA ligase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0148360.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)