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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0151500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0151500
Locus	HORVU.MOREX.r2.2HG0151500.1
URL	Gene Ontology GO:0000086 [ Show all 68 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 70 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB GO:0000086; biological_process; G2/M transition of mitotic cell cycle GO:0000790; cellular_component; nuclear chromatin GO:0001556; biological_process; oocyte maturation GO:0004435; molecular_function; phosphatidylinositol phospholipase C activity GO:0004871; molecular_function; obsolete signal transducer activity GO:0005096; molecular_function; GTPase activator activity GO:0005509; molecular_function; calcium ion binding GO:0005515; molecular_function; protein binding GO:0005516; molecular_function; calmodulin binding GO:0005521; molecular_function; lamin binding GO:0005546; molecular_function; phosphatidylinositol-4, 5-bisphosphate binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005886; cellular_component; plasma membrane GO:0006397; biological_process; mRNA processing GO:0006629; biological_process; lipid metabolic process GO:0007155; biological_process; cell adhesion GO:0007165; biological_process; signal transduction GO:0007213; biological_process; G protein-coupled acetylcholine receptor signaling pathway GO:0007215; biological_process; glutamate receptor signaling pathway GO:0007420; biological_process; brain development GO:0007613; biological_process; memory GO:0008081; molecular_function; phosphoric diester hydrolase activity GO:0008277; biological_process; regulation of G protein-coupled receptor signaling pathway GO:0008286; biological_process; insulin receptor signaling pathway GO:0016020; cellular_component; membrane GO:0016042; biological_process; lipid catabolic process GO:0016607; cellular_component; nuclear speck GO:0016787; molecular_function; hydrolase activity GO:0019899; molecular_function; enzyme binding GO:0021987; biological_process; cerebral cortex development GO:0030218; biological_process; erythrocyte differentiation GO:0030225; biological_process; macrophage differentiation GO:0031161; biological_process; phosphatidylinositol catabolic process GO:0031965; cellular_component; nuclear membrane GO:0032417; biological_process; positive regulation of sodium:proton antiporter activity GO:0032735; biological_process; positive regulation of interleukin-12 production GO:0032957; biological_process; inositol trisphosphate metabolic process GO:0034284; biological_process; response to monosaccharide GO:0035556; biological_process; intracellular signal transduction GO:0035722; biological_process; interleukin-12-mediated signaling pathway GO:0035723; biological_process; interleukin-15-mediated signaling pathway GO:0040019; biological_process; positive regulation of embryonic development GO:0042803; molecular_function; protein homodimerization activity GO:0043209; cellular_component; myelin sheath GO:0043434; biological_process; response to peptide hormone GO:0043547; biological_process; positive regulation of GTPase activity GO:0045444; biological_process; fat cell differentiation GO:0045663; biological_process; positive regulation of myoblast differentiation GO:0045892; biological_process; negative regulation of transcription, DNA-templated GO:0045893; biological_process; positive regulation of transcription, DNA-templated GO:0046330; biological_process; positive regulation of JNK cascade GO:0046488; biological_process; phosphatidylinositol metabolic process GO:0048009; biological_process; insulin-like growth factor receptor signaling pathway GO:0048639; biological_process; positive regulation of developmental growth GO:0051726; biological_process; regulation of cell cycle GO:0060466; biological_process; activation of meiosis involved in egg activation GO:0070498; biological_process; interleukin-1-mediated signaling pathway GO:0080154; biological_process; regulation of fertilization GO:1900087; biological_process; positive regulation of G1/S transition of mitotic cell cycle GO:1902618; biological_process; cellular response to fluoride GO:1904117; biological_process; cellular response to vasopressin GO:1904637; biological_process; cellular response to ionomycin GO:1905631; biological_process; cellular response to glyceraldehyde GO:2000344; biological_process; positive regulation of acrosome reaction GO:2000438; biological_process; negative regulation of monocyte extravasation GO:2000560; biological_process; positive regulation of CD24 biosynthetic process
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0151500.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)