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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0153240

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0153240
Locus	HORVU.MOREX.r2.2HG0153240.1
URL	Gene Ontology GO:0002091 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Sphingoid long-chain bases kinase 1 GO:0002091; biological_process; negative regulation of receptor internalization GO:0004860; molecular_function; protein kinase inhibitor activity GO:0005737; cellular_component; cytoplasm GO:0005783; cellular_component; endoplasmic reticulum GO:0005886; cellular_component; plasma membrane GO:0006469; biological_process; negative regulation of protein kinase activity GO:0007626; biological_process; locomotory behavior GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0019221; biological_process; cytokine-mediated signaling pathway GO:0030054; cellular_component; cell junction GO:0030424; cellular_component; axon GO:0030426; cellular_component; growth cone GO:0035418; biological_process; protein localization to synapse GO:0035640; biological_process; exploration behavior GO:0045202; cellular_component; synapse GO:0045211; cellular_component; postsynaptic membrane GO:0046426; biological_process; negative regulation of receptor signaling pathway via JAK-STAT GO:0050808; biological_process; synapse organization GO:0051965; biological_process; positive regulation of synapse assembly GO:0060076; cellular_component; excitatory synapse GO:0060291; biological_process; long-term synaptic potentiation
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0153240.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)