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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0166040

[What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0166040
Locus	HORVU.MOREX.r2.2HG0166040.1
URL	Gene Ontology GO:0005085 [ Show all 19 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 21 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: transcription factor-like protein GO:0005085; molecular_function; guanyl-nucleotide exchange factor activity GO:0005096; molecular_function; GTPase activator activity GO:0005730; cellular_component; nucleolus GO:0005737; cellular_component; cytoplasm GO:0005794; cellular_component; Golgi apparatus GO:0005829; cellular_component; cytosol GO:0005886; cellular_component; plasma membrane GO:0007264; biological_process; small GTPase mediated signal transduction GO:0016020; cellular_component; membrane GO:0017124; molecular_function; SH3 domain binding GO:0030165; molecular_function; PDZ domain binding GO:0030971; molecular_function; receptor tyrosine kinase binding GO:0032420; cellular_component; stereocilium GO:0032421; cellular_component; stereocilium bundle GO:0043547; biological_process; positive regulation of GTPase activity GO:0048365; molecular_function; Rac GTPase binding GO:0060326; biological_process; cell chemotaxis GO:1904694; biological_process; negative regulation of vascular smooth muscle contraction GO:1904754; biological_process; positive regulation of vascular associated smooth muscle cell migration
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0166040.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)