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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0170290

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0170290
Locus	HORVU.MOREX.r2.2HG0170290.1
URL	Gene Ontology GO:0001555 [ Show all 25 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 27 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: dicer-like 3 GO:0001555; biological_process; oocyte growth GO:0001701; biological_process; in utero embryonic development GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0006325; biological_process; chromatin organization GO:0006342; biological_process; chromatin silencing GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0008168; molecular_function; methyltransferase activity GO:0008284; biological_process; positive regulation of cell population proliferation GO:0010468; biological_process; regulation of gene expression GO:0016740; molecular_function; transferase activity GO:0018024; molecular_function; histone-lysine N-methyltransferase activity GO:0032259; biological_process; methylation GO:0033148; biological_process; positive regulation of intracellular estrogen receptor signaling pathway GO:0035097; cellular_component; histone methyltransferase complex GO:0042800; molecular_function; histone methyltransferase activity (H3-K4 specific) GO:0043627; biological_process; response to estrogen GO:0044212; molecular_function; transcription regulatory region DNA binding GO:0044666; cellular_component; MLL3/4 complex GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0046872; molecular_function; metal ion binding GO:0048477; biological_process; oogenesis GO:0051568; biological_process; histone H3-K4 methylation
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0170290.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)