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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0171420

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0171420
Locus	HORVU.MOREX.r2.2HG0171420.1
URL	Gene Ontology GO:0000155 [ Show all 23 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Hypoxia sensor histidine kinase response regulator DosT GO:0000155; molecular_function; phosphorelay sensor kinase activity GO:0000160; biological_process; phosphorelay signal transduction system GO:0000287; molecular_function; magnesium ion binding GO:0004672; molecular_function; protein kinase activity GO:0004673; molecular_function; protein histidine kinase activity GO:0005509; molecular_function; calcium ion binding GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0016021; cellular_component; integral component of membrane GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0018106; biological_process; peptidyl-histidine phosphorylation GO:0019825; molecular_function; oxygen binding GO:0019826; molecular_function; oxygen sensor activity GO:0020037; molecular_function; heme binding GO:0023014; biological_process; signal transduction by protein phosphorylation GO:0046777; biological_process; protein autophosphorylation GO:0046872; molecular_function; metal ion binding GO:0046983; molecular_function; protein dimerization activity GO:0070025; molecular_function; carbon monoxide binding GO:0070026; molecular_function; nitric oxide binding GO:0070483; biological_process; detection of hypoxia
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0171420.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)