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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0172520

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0172520
Locus	HORVU.MOREX.r2.2HG0172520.1
URL	Gene Ontology GO:0004114 [ Show all 8 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 10 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Wound-responsive family protein GO:0004114; molecular_function; 3', 5'-cyclic-nucleotide phosphodiesterase activity GO:0004117; molecular_function; calmodulin-dependent cyclic-nucleotide phosphodiesterase activity GO:0005516; molecular_function; calmodulin binding GO:0005829; cellular_component; cytosol GO:0007165; biological_process; signal transduction GO:0008081; molecular_function; phosphoric diester hydrolase activity GO:0016787; molecular_function; hydrolase activity GO:0046872; molecular_function; metal ion binding
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0172520.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)