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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0213070

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0213070
Locus	HORVU.MOREX.r2.3HG0213070.1
URL	Gene Ontology GO:0000139 [ Show all 23 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: NEDD8-activating enzyme E1 catalytic subunit GO:0000139; cellular_component; Golgi membrane GO:0002474; biological_process; antigen processing and presentation of peptide antigen via MHC class I GO:0005515; molecular_function; protein binding GO:0005737; cellular_component; cytoplasm GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0005829; cellular_component; cytosol GO:0006886; biological_process; intracellular protein transport GO:0006888; biological_process; endoplasmic reticulum to Golgi vesicle-mediated transport GO:0008270; molecular_function; zinc ion binding GO:0012507; cellular_component; ER to Golgi transport vesicle membrane GO:0015031; biological_process; protein transport GO:0016020; cellular_component; membrane GO:0016192; biological_process; vesicle-mediated transport GO:0019886; biological_process; antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0030127; cellular_component; COPII vesicle coat GO:0031410; cellular_component; cytoplasmic vesicle GO:0042632; biological_process; cholesterol homeostasis GO:0045714; biological_process; regulation of low-density lipoprotein particle receptor biosynthetic process GO:0046872; molecular_function; metal ion binding GO:0048208; biological_process; COPII vesicle coating GO:0050714; biological_process; positive regulation of protein secretion GO:0090110; biological_process; COPII-coated vesicle cargo loading
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0213070.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)