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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0222290

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0222290
Locus	HORVU.MOREX.r2.3HG0222290.1
URL	Gene Ontology GO:0015991 [ Show all 15 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Mutator-like transposase-like GO:1902600; biological_process; proton transmembrane transport The GO term GO:0015991 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:1902600 GO:0005515; molecular_function; protein binding GO:0005765; cellular_component; lysosomal membrane GO:0006811; biological_process; ion transport GO:0007034; biological_process; vacuolar transport GO:0007035; biological_process; vacuolar acidification GO:0008553; molecular_function; proton-exporting ATPase activity, phosphorylative mechanism GO:0015078; molecular_function; proton transmembrane transporter activity GO:0016471; cellular_component; vacuolar proton-transporting V-type ATPase complex GO:0030139; cellular_component; endocytic vesicle GO:0031164; cellular_component; contractile vacuolar membrane GO:0032009; cellular_component; early phagosome GO:0033179; cellular_component; proton-transporting V-type ATPase, V0 domain GO:0045335; cellular_component; phagocytic vesicle GO:0046961; molecular_function; proton-transporting ATPase activity, rotational mechanism
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0222290.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)