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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0232820

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0232820
Locus	HORVU.MOREX.r2.3HG0232820.1
URL	Gene Ontology GO:0000166 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: F-box family protein GO:0000166; molecular_function; nucleotide binding GO:0002237; biological_process; response to molecule of bacterial origin GO:0003677; molecular_function; DNA binding GO:0003909; molecular_function; DNA ligase activity GO:0003910; molecular_function; DNA ligase (ATP) activity GO:0005524; molecular_function; ATP binding GO:0006260; biological_process; DNA replication GO:0006281; biological_process; DNA repair GO:0006303; biological_process; double-strand break repair via nonhomologous end joining GO:0006310; biological_process; DNA recombination GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0006979; biological_process; response to oxidative stress GO:0009409; biological_process; response to cold GO:0009845; biological_process; seed germination GO:0010225; biological_process; response to UV-C GO:0015074; biological_process; DNA integration GO:0016874; molecular_function; ligase activity GO:0048316; biological_process; seed development GO:0051103; biological_process; DNA ligation involved in DNA repair GO:0071897; biological_process; DNA biosynthetic process GO:1904975; biological_process; response to bleomycin GO:2000685; biological_process; positive regulation of cellular response to X-ray
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0232820.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)