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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0237510

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0237510
Locus	HORVU.MOREX.r2.3HG0237510.1
URL	Gene Ontology GO:0000977 [ Show all 12 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Protodermal factor 1 GO:0000977; molecular_function; RNA polymerase II regulatory region sequence-specific DNA binding GO:0003677; molecular_function; DNA binding GO:0003700; molecular_function; DNA-binding transcription factor activity GO:0005634; cellular_component; nucleus GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0010223; biological_process; secondary shoot formation GO:0010228; biological_process; vegetative to reproductive phase transition of meristem GO:0010311; biological_process; lateral root formation GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0046983; molecular_function; protein dimerization activity GO:0048366; biological_process; leaf development
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0237510.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)