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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0238550

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0238550
Locus	HORVU.MOREX.r2.3HG0238550.1
URL	Gene Ontology GO:0004435 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Werner Syndrome-like exonuclease GO:0004435; molecular_function; phosphatidylinositol phospholipase C activity GO:0004629; molecular_function; phospholipase C activity GO:0004871; molecular_function; obsolete signal transducer activity GO:0005515; molecular_function; protein binding GO:0005622; cellular_component; intracellular GO:0005886; cellular_component; plasma membrane GO:0006629; biological_process; lipid metabolic process GO:0007165; biological_process; signal transduction GO:0008081; molecular_function; phosphoric diester hydrolase activity GO:0009553; biological_process; embryo sac development GO:0009556; biological_process; microsporogenesis GO:0010601; biological_process; positive regulation of auxin biosynthetic process GO:0016020; cellular_component; membrane GO:0016042; biological_process; lipid catabolic process GO:0016787; molecular_function; hydrolase activity GO:0035556; biological_process; intracellular signal transduction GO:0042742; biological_process; defense response to bacterium GO:0048437; biological_process; floral organ development
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0238550.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)