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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0239300

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.3HG0239300
Locus
HORVU.MOREX.r2.3HG0239300.1
URL
Gene Ontology GO:0005515
[ Show all 14 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 16 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta).
Functional annotation published with the genome: GATA transcription factor
GO:0005515; molecular_function; protein binding
GO:0005737; cellular_component; cytoplasm
GO:0005856; cellular_component; cytoskeleton
GO:0005886; cellular_component; plasma membrane
GO:0014069; cellular_component; postsynaptic density
GO:0016020; cellular_component; membrane
GO:0030054; cellular_component; cell junction
GO:0030165; molecular_function; PDZ domain binding
GO:0043197; cellular_component; dendritic spine
GO:0043621; molecular_function; protein self-association
GO:0045202; cellular_component; synapse
GO:0045211; cellular_component; postsynaptic membrane
GO:0051260; biological_process; protein homooligomerization
GO:0061001; biological_process; regulation of dendritic spine morphogenesis
Type
Genomic
Sequence
HORVU.MOREX.r2.3HG0239300.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)