Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.4HG0285240

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0285240
Locus	HORVU.MOREX.r2.4HG0285240.1
URL	Gene Ontology GO:0004365 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta GO:0004365; molecular_function; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0006006; biological_process; glucose metabolic process GO:0006094; biological_process; gluconeogenesis GO:0006096; biological_process; glycolytic process GO:0016491; molecular_function; oxidoreductase activity GO:0016620; molecular_function; oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor GO:0030317; biological_process; flagellated sperm motility GO:0045821; biological_process; positive regulation of glycolytic process GO:0050661; molecular_function; NADP binding GO:0051287; molecular_function; NAD binding GO:0055114; biological_process; oxidation-reduction process GO:0061621; biological_process; canonical glycolysis
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0285240.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)