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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0340400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0340400
Locus	HORVU.MOREX.r2.4HG0340400.1
URL	Gene Ontology GO:0003994 [ Show all 17 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 19 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Pentatricopeptide repeat-containing protein GO:0003994; molecular_function; aconitate hydratase activity GO:0005507; molecular_function; copper ion binding GO:0005739; cellular_component; mitochondrion GO:0005773; cellular_component; vacuole GO:0005829; cellular_component; cytosol GO:0005886; cellular_component; plasma membrane GO:0006101; biological_process; citrate metabolic process GO:0006102; biological_process; isocitrate metabolic process GO:0008152; biological_process; metabolic process GO:0009506; cellular_component; plasmodesma GO:0009651; biological_process; response to salt stress GO:0016829; molecular_function; lyase activity GO:0048027; molecular_function; mRNA 5'-UTR binding GO:0048046; cellular_component; apoplast GO:0051536; molecular_function; iron-sulfur cluster binding GO:0051539; molecular_function; 4 iron, 4 sulfur cluster binding GO:1990641; biological_process; response to iron ion starvation
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0340400.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)