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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0351920

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0351920
Locus	HORVU.MOREX.r2.5HG0351920.1
URL	Gene Ontology GO:0000045 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Zinc finger X-chromosomal protein GO:0000045; biological_process; autophagosome assembly GO:0000139; cellular_component; Golgi membrane GO:0000407; cellular_component; phagophore assembly site GO:0000422; biological_process; autophagy of mitochondrion GO:0005739; cellular_component; mitochondrion GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0005794; cellular_component; Golgi apparatus GO:0006914; biological_process; autophagy GO:0015031; biological_process; protein transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0030659; cellular_component; cytoplasmic vesicle membrane GO:0031410; cellular_component; cytoplasmic vesicle GO:0032258; biological_process; cytoplasm to vacuole transport by the Cvt pathway GO:0034045; cellular_component; phagophore assembly site membrane GO:0034497; biological_process; protein localization to phagophore assembly site GO:0034727; biological_process; piecemeal microautophagy of the nucleus GO:0044805; biological_process; late nucleophagy GO:0051260; biological_process; protein homooligomerization GO:0061709; biological_process; reticulophagy GO:0061908; cellular_component; phagophore
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0351920.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)