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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0355260

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0355260
Locus	HORVU.MOREX.r2.5HG0355260.1
URL	Gene Ontology GO:0002376 [ Show all 11 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 13 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Retrotransposon protein, putative, unclassified GO:0002376; biological_process; immune system process GO:0004833; molecular_function; tryptophan 2, 3-dioxygenase activity GO:0005737; cellular_component; cytoplasm GO:0006569; biological_process; tryptophan catabolic process GO:0016491; molecular_function; oxidoreductase activity GO:0019441; biological_process; tryptophan catabolic process to kynurenine GO:0020037; molecular_function; heme binding GO:0033754; molecular_function; indoleamine 2, 3-dioxygenase activity GO:0046872; molecular_function; metal ion binding GO:0051213; molecular_function; dioxygenase activity GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0355260.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)