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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0357020

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0357020
Locus	HORVU.MOREX.r2.5HG0357020.1
URL	Gene Ontology GO:0004729 [ Show all 8 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 10 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RING/U-box superfamily protein GO:0004729; molecular_function; oxygen-dependent protoporphyrinogen oxidase activity GO:0006779; biological_process; porphyrin-containing compound biosynthetic process GO:0006782; biological_process; protoporphyrinogen IX biosynthetic process GO:0009507; cellular_component; chloroplast GO:0009534; cellular_component; chloroplast thylakoid GO:0009941; cellular_component; chloroplast envelope GO:0016491; molecular_function; oxidoreductase activity GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0357020.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)