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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0360940

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0360940
Locus	HORVU.MOREX.r2.5HG0360940.1
URL	Gene Ontology GO:0005794 [ Show all 15 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 17 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Mediator of RNA polymerase II transcription subunit 12 GO:0005794; cellular_component; Golgi apparatus GO:0006486; biological_process; protein glycosylation GO:0006487; biological_process; protein N-linked glycosylation GO:0008424; molecular_function; glycoprotein 6-alpha-L-fucosyltransferase activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016740; molecular_function; transferase activity GO:0016757; molecular_function; transferase activity, transferring glycosyl groups GO:0017124; molecular_function; SH3 domain binding GO:0018279; biological_process; protein N-linked glycosylation via asparagine GO:0032580; cellular_component; Golgi cisterna membrane GO:0033578; biological_process; protein glycosylation in Golgi GO:0036071; biological_process; N-glycan fucosylation GO:0046368; biological_process; GDP-L-fucose metabolic process GO:0046921; molecular_function; alpha-(1, 6)-fucosyltransferase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0360940.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)