Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.5HG0367990

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0367990
Locus	HORVU.MOREX.r2.5HG0367990.1
URL	Gene Ontology GO:0005509 [ Show all 8 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 10 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Pectin lyase-like superfamily protein GO:0005509; molecular_function; calcium ion binding GO:0005515; molecular_function; protein binding GO:0005886; cellular_component; plasma membrane GO:0008150; biological_process; biological_process GO:0015031; biological_process; protein transport GO:0016020; cellular_component; membrane GO:0030122; cellular_component; AP-2 adaptor complex GO:0030132; cellular_component; clathrin coat of coated pit
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0367990.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)