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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0386610

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0386610
Locus	HORVU.MOREX.r2.5HG0386610.1
URL	Gene Ontology GO:0000166 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RNA-directed DNA polymerase (Reverse transcriptase) GO:0000166; molecular_function; nucleotide binding GO:0004611; molecular_function; phosphoenolpyruvate carboxykinase activity GO:0004613; molecular_function; phosphoenolpyruvate carboxykinase (GTP) activity GO:0005525; molecular_function; GTP binding GO:0005576; cellular_component; extracellular region GO:0005618; cellular_component; cell wall GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005886; cellular_component; plasma membrane GO:0006094; biological_process; gluconeogenesis GO:0010106; biological_process; cellular response to iron ion starvation GO:0016829; molecular_function; lyase activity GO:0016831; molecular_function; carboxy-lyase activity GO:0017076; molecular_function; purine nucleotide binding GO:0046872; molecular_function; metal ion binding GO:0052572; biological_process; response to host immune response
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0386610.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)