GrainGenes Probe Report: HORVU.MOREX.r2.5HG0392320
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.5HG0392320
Locus
HORVU.MOREX.r2.5HG0392320.1
URL
Gene Ontology GO:0000938
[ Show all 13 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 15 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: UvrABC system protein A GO:0000938; cellular_component; GARP complex GO:0003674; molecular_function; molecular_function GO:0005737; cellular_component; cytoplasm GO:0005768; cellular_component; endosome GO:0005794; cellular_component; Golgi apparatus GO:0005829; cellular_component; cytosol GO:0006886; biological_process; intracellular protein transport GO:0006896; biological_process; Golgi to vacuole transport GO:0010008; cellular_component; endosome membrane GO:0015031; biological_process; protein transport GO:0016020; cellular_component; membrane GO:0019905; molecular_function; syntaxin binding GO:0042147; biological_process; retrograde transport, endosome to Golgi
Type
Genomic
Sequence
HORVU.MOREX.r2.5HG0392320.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.5HG0392320
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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