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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0392680

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0392680
Locus	HORVU.MOREX.r2.5HG0392680.1
URL	Gene Ontology GO:0003723 [ Show all 15 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 17 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Pleiotropic drug resistance ABC transporter GO:0003723; molecular_function; RNA binding GO:0004518; molecular_function; nuclease activity GO:0004519; molecular_function; endonuclease activity GO:0004525; molecular_function; ribonuclease III activity GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0006364; biological_process; rRNA processing GO:0006396; biological_process; RNA processing GO:0016442; cellular_component; RISC complex GO:0016787; molecular_function; hydrolase activity GO:0030422; biological_process; production of siRNA involved in RNA interference GO:0046872; molecular_function; metal ion binding GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis GO:0090501; biological_process; RNA phosphodiester bond hydrolysis GO:0090502; biological_process; RNA phosphodiester bond hydrolysis, endonucleolytic
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0392680.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)