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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0395470

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0395470
Locus	HORVU.MOREX.r2.5HG0395470.1
URL	Gene Ontology GO:0005634 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RNA ligase/cyclic nucleotide phosphodiesterase GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005739; cellular_component; mitochondrion GO:0005768; cellular_component; endosome GO:0005769; cellular_component; early endosome GO:0008333; biological_process; endosome to lysosome transport GO:0019896; biological_process; axonal transport of mitochondrion GO:0030425; cellular_component; dendrite GO:0030911; molecular_function; TPR domain binding GO:0044295; cellular_component; axonal growth cone GO:0048471; cellular_component; perinuclear region of cytoplasm GO:0048813; biological_process; dendrite morphogenesis GO:0050772; biological_process; positive regulation of axonogenesis GO:0050811; molecular_function; GABA receptor binding GO:0098957; biological_process; anterograde axonal transport of mitochondrion GO:1904115; cellular_component; axon cytoplasm
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0395470.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)