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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0402530

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0402530
Locus	HORVU.MOREX.r2.5HG0402530.1
URL	Gene Ontology GO:0000166 [ Show all 24 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 26 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Protease 2 GO:0000166; molecular_function; nucleotide binding GO:0000209; biological_process; protein polyubiquitination GO:0004842; molecular_function; ubiquitin-protein transferase activity GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005680; cellular_component; anaphase-promoting complex GO:0005737; cellular_component; cytoplasm GO:0006511; biological_process; ubiquitin-dependent protein catabolic process GO:0007049; biological_process; cell cycle GO:0010458; biological_process; exit from mitosis GO:0010994; biological_process; free ubiquitin chain polymerization GO:0016567; biological_process; protein ubiquitination GO:0016740; molecular_function; transferase activity GO:0031145; biological_process; anaphase-promoting complex-dependent catabolic process GO:0031625; molecular_function; ubiquitin protein ligase binding GO:0035519; biological_process; protein K29-linked ubiquitination GO:0044314; biological_process; protein K27-linked ubiquitination GO:0051301; biological_process; cell division GO:0061630; molecular_function; ubiquitin protein ligase activity GO:0061631; molecular_function; ubiquitin conjugating enzyme activity GO:0070534; biological_process; protein K63-linked ubiquitination GO:0070979; biological_process; protein K11-linked ubiquitination GO:0085020; biological_process; protein K6-linked ubiquitination GO:1904668; biological_process; positive regulation of ubiquitin protein ligase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0402530.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)