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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0422480

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0422480
Locus	HORVU.MOREX.r2.5HG0422480.1
URL	Gene Ontology GO:0000165 [ Show all 34 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 36 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: F-box family protein GO:0000165; biological_process; MAPK cascade GO:0000166; molecular_function; nucleotide binding GO:0000186; biological_process; activation of MAPKK activity GO:0004672; molecular_function; protein kinase activity GO:0004674; molecular_function; protein serine/threonine kinase activity GO:0004709; molecular_function; MAP kinase kinase kinase activity GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0006281; biological_process; DNA repair GO:0006468; biological_process; protein phosphorylation GO:0006915; biological_process; apoptotic process GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0007095; biological_process; mitotic G2 DNA damage checkpoint GO:0007346; biological_process; regulation of mitotic cell cycle GO:0007399; biological_process; nervous system development GO:0008022; molecular_function; protein C-terminus binding GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0019901; molecular_function; protein kinase binding GO:0030295; molecular_function; protein kinase activator activity GO:0031098; biological_process; stress-activated protein kinase signaling cascade GO:0031489; molecular_function; myosin V binding GO:0032147; biological_process; activation of protein kinase activity GO:0032874; biological_process; positive regulation of stress-activated MAPK cascade GO:0032956; biological_process; regulation of actin cytoskeleton organization GO:0042981; biological_process; regulation of apoptotic process GO:0043539; molecular_function; protein serine/threonine kinase activator activity GO:0046330; biological_process; positive regulation of JNK cascade GO:0046777; biological_process; protein autophosphorylation GO:0051493; biological_process; regulation of cytoskeleton organization GO:0070507; biological_process; regulation of microtubule cytoskeleton organization GO:0071902; biological_process; positive regulation of protein serine/threonine kinase activity GO:0097194; biological_process; execution phase of apoptosis
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0422480.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)