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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0433350

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0433350
Locus	HORVU.MOREX.r2.5HG0433350.1
URL	Gene Ontology GO:0005515 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Plant invertase/pectin methylesterase inhibitor superfamily protein GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005886; cellular_component; plasma membrane GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0008013; molecular_function; beta-catenin binding GO:0010977; biological_process; negative regulation of neuron projection development GO:0016020; cellular_component; membrane GO:0030177; biological_process; positive regulation of Wnt signaling pathway GO:0030336; biological_process; negative regulation of cell migration GO:0030837; biological_process; negative regulation of actin filament polymerization GO:0032587; cellular_component; ruffle membrane GO:0035024; biological_process; negative regulation of Rho protein signal transduction GO:0042995; cellular_component; cell projection GO:0046627; biological_process; negative regulation of insulin receptor signaling pathway GO:0090263; biological_process; positive regulation of canonical Wnt signaling pathway GO:0090303; biological_process; positive regulation of wound healing GO:1900025; biological_process; negative regulation of substrate adhesion-dependent cell spreading GO:1900028; biological_process; negative regulation of ruffle assembly GO:2000114; biological_process; regulation of establishment of cell polarity GO:2000393; biological_process; negative regulation of lamellipodium morphogenesis
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0433350.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)