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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0436790

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0436790
Locus	HORVU.MOREX.r2.5HG0436790.1
URL	Gene Ontology GO:0000407 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Pathogenesis-related thaumatin family protein GO:0000407; cellular_component; phagophore assembly site GO:0005515; molecular_function; protein binding GO:0005545; molecular_function; 1-phosphatidylinositol binding GO:0005547; molecular_function; phosphatidylinositol-3, 4, 5-trisphosphate binding GO:0005776; cellular_component; autophagosome GO:0005783; cellular_component; endoplasmic reticulum GO:0005794; cellular_component; Golgi apparatus GO:0005795; cellular_component; Golgi stack GO:0008270; molecular_function; zinc ion binding GO:0009267; biological_process; cellular response to starvation GO:0010923; biological_process; negative regulation of phosphatase activity GO:0016236; biological_process; macroautophagy GO:0043325; molecular_function; phosphatidylinositol-3, 4-bisphosphate binding GO:0044233; cellular_component; mitochondria-associated endoplasmic reticulum membrane GO:0046872; molecular_function; metal ion binding GO:0048471; cellular_component; perinuclear region of cytoplasm GO:0097629; cellular_component; extrinsic component of omegasome membrane GO:1990462; cellular_component; omegasome
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0436790.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)