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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0443280

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0443280
Locus	HORVU.MOREX.r2.5HG0443280.1
URL	Gene Ontology GO:0000166 [ Show all 21 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 23 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Membrane protein insertase YidC GO:0000166; molecular_function; nucleotide binding GO:0000287; molecular_function; magnesium ion binding GO:0000398; biological_process; mRNA splicing, via spliceosome GO:0003723; molecular_function; RNA binding GO:0004652; molecular_function; polynucleotide adenylyltransferase activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005737; cellular_component; cytoplasm GO:0006369; biological_process; termination of RNA polymerase II transcription GO:0006378; biological_process; mRNA polyadenylation GO:0006397; biological_process; mRNA processing GO:0016740; molecular_function; transferase activity GO:0016779; molecular_function; nucleotidyltransferase activity GO:0030145; molecular_function; manganese ion binding GO:0031123; biological_process; RNA 3'-end processing GO:0031124; biological_process; mRNA 3'-end processing GO:0031440; biological_process; regulation of mRNA 3'-end processing GO:0043631; biological_process; RNA polyadenylation GO:0046872; molecular_function; metal ion binding
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0443280.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)