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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0446010

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0446010
Locus	HORVU.MOREX.r2.5HG0446010.1
URL	Gene Ontology GO:0005515 [ Show all 46 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 48 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: F-box family protein GO:0005515; molecular_function; protein binding GO:0005622; cellular_component; intracellular GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005886; cellular_component; plasma membrane GO:0007016; biological_process; cytoskeletal anchoring at plasma membrane GO:0007399; biological_process; nervous system development GO:0007616; biological_process; long-term memory GO:0008022; molecular_function; protein C-terminus binding GO:0008306; biological_process; associative learning GO:0008328; cellular_component; ionotropic glutamate receptor complex GO:0014069; cellular_component; postsynaptic density GO:0016020; cellular_component; membrane GO:0017124; molecular_function; SH3 domain binding GO:0030054; cellular_component; cell junction GO:0030154; biological_process; cell differentiation GO:0030159; molecular_function; receptor signaling complex adaptor activity GO:0030160; molecular_function; GKAP/Homer scaffold activity GO:0030425; cellular_component; dendrite GO:0030534; biological_process; adult behavior GO:0031877; molecular_function; somatostatin receptor binding GO:0032232; biological_process; negative regulation of actin filament bundle assembly GO:0035176; biological_process; social behavior GO:0035255; molecular_function; ionotropic glutamate receptor binding GO:0035418; biological_process; protein localization to synapse GO:0042048; biological_process; olfactory behavior GO:0042802; molecular_function; identical protein binding GO:0043005; cellular_component; neuron projection GO:0043197; cellular_component; dendritic spine GO:0044877; molecular_function; protein-containing complex binding GO:0045202; cellular_component; synapse GO:0045211; cellular_component; postsynaptic membrane GO:0046959; biological_process; habituation GO:0050885; biological_process; neuromuscular process controlling balance GO:0050894; biological_process; determination of affect GO:0060013; biological_process; righting reflex GO:0060074; biological_process; synapse maturation GO:0060076; cellular_component; excitatory synapse GO:0060997; biological_process; dendritic spine morphogenesis GO:0060999; biological_process; positive regulation of dendritic spine development GO:0065003; biological_process; protein-containing complex assembly GO:0071532; molecular_function; ankyrin repeat binding GO:0071625; biological_process; vocalization behavior GO:0097110; molecular_function; scaffold protein binding GO:2000311; biological_process; regulation of AMPA receptor activity GO:2000463; biological_process; positive regulation of excitatory postsynaptic potential
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0446010.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)