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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0477630

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0477630
Locus	HORVU.MOREX.r2.6HG0477630.1
URL	Gene Ontology GO:0000166 [ Show all 14 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 16 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase GO:0000166; molecular_function; nucleotide binding GO:0005524; molecular_function; ATP binding GO:0005886; cellular_component; plasma membrane GO:0006508; biological_process; proteolysis GO:0008565; molecular_function; obsolete protein transporter activity GO:0015440; molecular_function; ATPase-coupled peptide transmembrane transporter activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016787; molecular_function; hydrolase activity GO:0016887; molecular_function; ATPase activity GO:0030253; biological_process; protein secretion by the type I secretion system GO:0030256; cellular_component; type I protein secretion system complex GO:0042626; molecular_function; ATPase-coupled transmembrane transporter activity GO:0055085; biological_process; transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0477630.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)