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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0487200

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0487200
Locus	HORVU.MOREX.r2.6HG0487200.1
URL	Gene Ontology GO:0001591 [ Show all 132 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 134 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transposon Ty3-G Gag-Pol polyprotein GO:0001591; molecular_function; dopamine neurotransmitter receptor activity, coupled via Gi/Go GO:0001659; biological_process; temperature homeostasis GO:0001666; biological_process; response to hypoxia GO:0001669; cellular_component; acrosomal vesicle GO:0001933; biological_process; negative regulation of protein phosphorylation GO:0001963; biological_process; synaptic transmission, dopaminergic GO:0001964; biological_process; startle response GO:0001975; biological_process; response to amphetamine GO:0001976; biological_process; nervous system process involved in regulation of systemic arterial blood pressure GO:0002027; biological_process; regulation of heart rate GO:0002028; biological_process; regulation of sodium ion transport GO:0002031; biological_process; G protein-coupled receptor internalization GO:0002052; biological_process; positive regulation of neuroblast proliferation GO:0002092; biological_process; positive regulation of receptor internalization GO:0004871; molecular_function; obsolete signal transducer activity GO:0004930; molecular_function; G protein-coupled receptor activity GO:0004952; molecular_function; dopamine neurotransmitter receptor activity GO:0005102; molecular_function; signaling receptor binding GO:0005515; molecular_function; protein binding GO:0005623; cellular_component; cell GO:0005886; cellular_component; plasma membrane GO:0005887; cellular_component; integral component of plasma membrane GO:0006914; biological_process; autophagy GO:0007165; biological_process; signal transduction GO:0007186; biological_process; G protein-coupled receptor signaling pathway GO:0007188; biological_process; adenylate cyclase-modulating G protein-coupled receptor signaling pathway GO:0007195; biological_process; adenylate cyclase-inhibiting dopamine receptor signaling pathway GO:0007212; biological_process; dopamine receptor signaling pathway GO:0007270; biological_process; neuron-neuron synaptic transmission GO:0007409; biological_process; axonogenesis GO:0007416; biological_process; synapse assembly GO:0007608; biological_process; sensory perception of smell GO:0007616; biological_process; long-term memory GO:0007625; biological_process; grooming behavior GO:0007626; biological_process; locomotory behavior GO:0007628; biological_process; adult walking behavior GO:0007631; biological_process; feeding behavior GO:0008104; biological_process; protein localization GO:0008144; molecular_function; drug binding GO:0008285; biological_process; negative regulation of cell population proliferation GO:0008306; biological_process; associative learning GO:0008542; biological_process; visual learning GO:0009416; biological_process; response to light stimulus GO:0009636; biological_process; response to toxic substance GO:0010039; biological_process; response to iron ion GO:0014059; biological_process; regulation of dopamine secretion GO:0014069; cellular_component; postsynaptic density GO:0014854; biological_process; response to inactivity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016055; biological_process; Wnt signaling pathway GO:0016328; cellular_component; lateral plasma membrane GO:0021756; biological_process; striatum development GO:0021769; biological_process; orbitofrontal cortex development GO:0021853; biological_process; cerebral cortex GABAergic interneuron migration GO:0021984; biological_process; adenohypophysis development GO:0030007; biological_process; cellular potassium ion homeostasis GO:0030139; cellular_component; endocytic vesicle GO:0030336; biological_process; negative regulation of cell migration GO:0030424; cellular_component; axon GO:0030425; cellular_component; dendrite GO:0030432; biological_process; peristalsis GO:0030534; biological_process; adult behavior GO:0030672; cellular_component; synaptic vesicle membrane GO:0030900; biological_process; forebrain development GO:0031223; biological_process; auditory behavior GO:0031410; cellular_component; cytoplasmic vesicle GO:0032147; biological_process; activation of protein kinase activity GO:0032228; biological_process; regulation of synaptic transmission, GABAergic GO:0032467; biological_process; positive regulation of cytokinesis GO:0032922; biological_process; circadian regulation of gene expression GO:0033602; biological_process; negative regulation of dopamine secretion GO:0034776; biological_process; response to histamine GO:0035094; biological_process; response to nicotine GO:0035240; molecular_function; dopamine binding GO:0035255; molecular_function; ionotropic glutamate receptor binding GO:0035810; biological_process; positive regulation of urine volume GO:0035815; biological_process; positive regulation of renal sodium excretion GO:0036126; cellular_component; sperm flagellum GO:0040018; biological_process; positive regulation of multicellular organism growth GO:0042220; biological_process; response to cocaine GO:0042321; biological_process; negative regulation of circadian sleep/wake cycle, sleep GO:0042417; biological_process; dopamine metabolic process GO:0042493; biological_process; response to drug GO:0042756; biological_process; drinking behavior GO:0042802; molecular_function; identical protein binding GO:0042803; molecular_function; protein homodimerization activity GO:0043197; cellular_component; dendritic spine GO:0043204; cellular_component; perikaryon GO:0043266; biological_process; regulation of potassium ion transport GO:0043278; biological_process; response to morphine GO:0043408; biological_process; regulation of MAPK cascade GO:0043473; biological_process; pigmentation GO:0043666; biological_process; regulation of phosphoprotein phosphatase activity GO:0043679; cellular_component; axon terminus GO:0045471; biological_process; response to ethanol GO:0045745; biological_process; positive regulation of G protein-coupled receptor signaling pathway GO:0045776; biological_process; negative regulation of blood pressure GO:0045824; biological_process; negative regulation of innate immune response GO:0045840; biological_process; positive regulation of mitotic nuclear division GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0046676; biological_process; negative regulation of insulin secretion GO:0046717; biological_process; acid secretion GO:0046982; molecular_function; protein heterodimerization activity GO:0048148; biological_process; behavioral response to cocaine GO:0048149; biological_process; behavioral response to ethanol GO:0048169; biological_process; regulation of long-term neuronal synaptic plasticity GO:0048678; biological_process; response to axon injury GO:0048755; biological_process; branching morphogenesis of a nerve GO:0050482; biological_process; arachidonic acid secretion GO:0050709; biological_process; negative regulation of protein secretion GO:0050769; biological_process; positive regulation of neurogenesis GO:0050804; biological_process; modulation of chemical synaptic transmission GO:0051209; biological_process; release of sequestered calcium ion into cytosol GO:0051481; biological_process; negative regulation of cytosolic calcium ion concentration GO:0051584; biological_process; regulation of dopamine uptake involved in synaptic transmission GO:0051586; biological_process; positive regulation of dopamine uptake involved in synaptic transmission GO:0051823; biological_process; regulation of synapse structural plasticity GO:0051898; biological_process; negative regulation of protein kinase B signaling GO:0051967; biological_process; negative regulation of synaptic transmission, glutamatergic GO:0060124; biological_process; positive regulation of growth hormone secretion GO:0060134; biological_process; prepulse inhibition GO:0060158; biological_process; phospholipase C-activating dopamine receptor signaling pathway GO:0060160; biological_process; negative regulation of dopamine receptor signaling pathway GO:0060170; cellular_component; ciliary membrane GO:0060548; biological_process; negative regulation of cell death GO:0070374; biological_process; positive regulation of ERK1 and ERK2 cascade GO:0090325; biological_process; regulation of locomotion involved in locomotory behavior GO:0097730; cellular_component; non-motile cilium GO:1900168; biological_process; positive regulation of glial cell-derived neurotrophic factor secretion GO:1900273; biological_process; positive regulation of long-term synaptic potentiation GO:1901386; biological_process; negative regulation of voltage-gated calcium channel activity
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0487200.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)