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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0500190

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0500190
Locus	HORVU.MOREX.r2.6HG0500190.1
URL	Gene Ontology GO:0000166 [ Show all 24 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 26 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: E3 ubiquitin-protein ligase GO:0000166; molecular_function; nucleotide binding GO:0005524; molecular_function; ATP binding GO:0005618; cellular_component; cell wall GO:0005634; cellular_component; nucleus GO:0009409; biological_process; response to cold GO:0009416; biological_process; response to light stimulus GO:0009507; cellular_component; chloroplast GO:0009535; cellular_component; chloroplast thylakoid membrane GO:0009536; cellular_component; plastid GO:0009570; cellular_component; chloroplast stroma GO:0009579; cellular_component; thylakoid GO:0009753; biological_process; response to jasmonic acid GO:0009941; cellular_component; chloroplast envelope GO:0010150; biological_process; leaf senescence GO:0010287; cellular_component; plastoglobule GO:0010319; cellular_component; stromule GO:0016020; cellular_component; membrane GO:0030234; molecular_function; enzyme regulator activity GO:0042742; biological_process; defense response to bacterium GO:0043085; biological_process; positive regulation of catalytic activity GO:0043531; molecular_function; ADP binding GO:0046863; molecular_function; ribulose-1, 5-bisphosphate carboxylase/oxygenase activator activity GO:0048046; cellular_component; apoplast GO:0050790; biological_process; regulation of catalytic activity
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0500190.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)