Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.6HG0504040

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0504040
Locus	HORVU.MOREX.r2.6HG0504040.1
URL	Gene Ontology GO:0008270 [ Show all 12 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Protein KINESIN LIGHT CHAIN-RELATED 3 GO:0008270; molecular_function; zinc ion binding GO:0016567; biological_process; protein ubiquitination GO:0019788; molecular_function; NEDD8 transferase activity GO:0031146; biological_process; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0031462; cellular_component; Cul2-RING ubiquitin ligase complex GO:0031463; cellular_component; Cul3-RING ubiquitin ligase complex GO:0031467; cellular_component; Cul7-RING ubiquitin ligase complex GO:0043224; cellular_component; nuclear SCF ubiquitin ligase complex GO:0045116; biological_process; protein neddylation GO:0061630; molecular_function; ubiquitin protein ligase activity GO:0080008; cellular_component; Cul4-RING E3 ubiquitin ligase complex GO:0097602; molecular_function; cullin family protein binding
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0504040.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)