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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0504050

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0504050
Locus	HORVU.MOREX.r2.6HG0504050.1
URL	Gene Ontology GO:0000146 [ Show all 34 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 36 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Glutathione S-transferase T3 GO:0000146; molecular_function; microfilament motor activity GO:0000147; biological_process; actin cortical patch assembly GO:0000166; molecular_function; nucleotide binding GO:0003774; molecular_function; motor activity GO:0003777; molecular_function; microtubule motor activity GO:0003779; molecular_function; actin binding GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005543; molecular_function; phospholipid binding GO:0005628; cellular_component; prospore membrane GO:0005737; cellular_component; cytoplasm GO:0005826; cellular_component; actomyosin contractile ring GO:0005856; cellular_component; cytoskeleton GO:0006897; biological_process; endocytosis GO:0007018; biological_process; microtubule-based movement GO:0008017; molecular_function; microtubule binding GO:0016459; cellular_component; myosin complex GO:0016787; molecular_function; hydrolase activity GO:0030036; biological_process; actin cytoskeleton organization GO:0030427; cellular_component; site of polarized growth GO:0030479; cellular_component; actin cortical patch GO:0030898; molecular_function; actin-dependent ATPase activity GO:0031097; cellular_component; medial cortex GO:0032153; cellular_component; cell division site GO:0043332; cellular_component; mating projection tip GO:0044853; cellular_component; plasma membrane raft GO:0044855; biological_process; plasma membrane raft distribution GO:0045010; biological_process; actin nucleation GO:0045160; cellular_component; myosin I complex GO:0051015; molecular_function; actin filament binding GO:0051127; biological_process; positive regulation of actin nucleation GO:0051285; cellular_component; cell cortex of cell tip GO:0051286; cellular_component; cell tip GO:0071963; biological_process; establishment or maintenance of cell polarity regulating cell shape
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0504050.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)