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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0524640

[What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0524640
Locus	HORVU.MOREX.r2.6HG0524640.1
URL	Gene Ontology GO:0003676 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RNA-binding region RNP-1 GO:0003676; molecular_function; nucleic acid binding GO:0003677; molecular_function; DNA binding GO:0003690; molecular_function; double-stranded DNA binding GO:0003697; molecular_function; single-stranded DNA binding GO:0003723; molecular_function; RNA binding GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005681; cellular_component; spliceosomal complex GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0006396; biological_process; RNA processing GO:0008143; molecular_function; poly(A) binding GO:0010468; biological_process; regulation of gene expression GO:0034046; molecular_function; poly(G) binding GO:0035722; biological_process; interleukin-12-mediated signaling pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0524640.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)