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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0526040

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0526040
Locus	HORVU.MOREX.r2.6HG0526040.1
URL	Gene Ontology GO:0000381 [ Show all 7 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 9 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Retrotransposon protein, putative, unclassified GO:0000381; biological_process; regulation of alternative mRNA splicing, via spliceosome GO:0000389; biological_process; mRNA 3'-splice site recognition GO:0003723; molecular_function; RNA binding GO:0005686; cellular_component; U2 snRNP GO:0006396; biological_process; RNA processing GO:0071004; cellular_component; U2-type prespliceosome GO:0071013; cellular_component; catalytic step 2 spliceosome
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0526040.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)