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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0527010

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0527010
Locus	HORVU.MOREX.r2.7HG0527010.1
URL	Gene Ontology GO:0001755 [ Show all 37 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 39 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: U-box domain-containing protein GO:0001755; biological_process; neural crest cell migration GO:0003007; biological_process; heart morphogenesis GO:0005096; molecular_function; GTPase activator activity GO:0005102; molecular_function; signaling receptor binding GO:0005109; molecular_function; frizzled binding GO:0005576; cellular_component; extracellular region GO:0005615; cellular_component; extracellular space GO:0005737; cellular_component; cytoplasm GO:0006468; biological_process; protein phosphorylation GO:0007275; biological_process; multicellular organism development GO:0007369; biological_process; gastrulation GO:0010470; biological_process; regulation of gastrulation GO:0010628; biological_process; positive regulation of gene expression GO:0016055; biological_process; Wnt signaling pathway GO:0030182; biological_process; neuron differentiation GO:0030295; molecular_function; protein kinase activator activity GO:0030308; biological_process; negative regulation of cell growth GO:0030335; biological_process; positive regulation of cell migration GO:0030336; biological_process; negative regulation of cell migration GO:0032147; biological_process; activation of protein kinase activity GO:0033337; biological_process; dorsal fin development GO:0034394; biological_process; protein localization to cell surface GO:0035567; biological_process; non-canonical Wnt signaling pathway GO:0043066; biological_process; negative regulation of apoptotic process GO:0043547; biological_process; positive regulation of GTPase activity GO:0044212; molecular_function; transcription regulatory region DNA binding GO:0045165; biological_process; cell fate commitment GO:0045892; biological_process; negative regulation of transcription, DNA-templated GO:0045893; biological_process; positive regulation of transcription, DNA-templated GO:0046330; biological_process; positive regulation of JNK cascade GO:0048793; biological_process; pronephros development GO:0051496; biological_process; positive regulation of stress fiber assembly GO:0060548; biological_process; negative regulation of cell death GO:0061101; biological_process; neuroendocrine cell differentiation GO:0062009; biological_process; secondary palate development GO:0090037; biological_process; positive regulation of protein kinase C signaling GO:0090090; biological_process; negative regulation of canonical Wnt signaling pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0527010.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)