GrainGenes Probe Report: HORVU.MOREX.r2.7HG0530270
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.7HG0530270
Locus
HORVU.MOREX.r2.7HG0530270.1
URL
Gene Ontology GO:0000184
[ Show all 13 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 15 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Phenylalanine--tRNA ligase beta subunit GO:0000184; biological_process; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000381; biological_process; regulation of alternative mRNA splicing, via spliceosome GO:0003676; molecular_function; nucleic acid binding GO:0003723; molecular_function; RNA binding GO:0003729; molecular_function; mRNA binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0006396; biological_process; RNA processing GO:0006397; biological_process; mRNA processing GO:0006417; biological_process; regulation of translation GO:0008380; biological_process; RNA splicing GO:0016607; cellular_component; nuclear speck GO:0051028; biological_process; mRNA transport
Type
Genomic
Sequence
HORVU.MOREX.r2.7HG0530270.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.7HG0530270
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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