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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0549480

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0549480
Locus	HORVU.MOREX.r2.7HG0549480.1
URL	Gene Ontology GO:0000278 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Pectin lyase-like superfamily protein GO:0000278; biological_process; mitotic cell cycle GO:0004888; molecular_function; transmembrane signaling receptor activity GO:0005774; cellular_component; vacuolar membrane GO:0005794; cellular_component; Golgi apparatus GO:0005886; cellular_component; plasma membrane GO:0006571; biological_process; tyrosine biosynthetic process GO:0007166; biological_process; cell surface receptor signaling pathway GO:0007202; biological_process; activation of phospholipase C activity GO:0009094; biological_process; L-phenylalanine biosynthetic process GO:0009735; biological_process; response to cytokinin GO:0009738; biological_process; abscisic acid-activated signaling pathway GO:0009742; biological_process; brassinosteroid mediated signaling pathway GO:0009785; biological_process; blue light signaling pathway GO:0009788; biological_process; negative regulation of abscisic acid-activated signaling pathway GO:0009845; biological_process; seed germination GO:0009908; biological_process; flower development GO:0009939; biological_process; positive regulation of gibberellic acid mediated signaling pathway GO:0010231; biological_process; maintenance of seed dormancy GO:0010244; biological_process; response to low fluence blue light stimulus by blue low-fluence system GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0032960; biological_process; regulation of inositol trisphosphate biosynthetic process
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0549480.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)