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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0550020

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0550020
Locus	HORVU.MOREX.r2.7HG0550020.1
URL	Gene Ontology GO:0000166 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Pup--protein ligase GO:0000166; molecular_function; nucleotide binding GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005618; cellular_component; cell wall GO:0005886; cellular_component; plasma membrane GO:0009405; biological_process; pathogenesis GO:0010498; biological_process; proteasomal protein catabolic process GO:0016874; molecular_function; ligase activity GO:0016879; molecular_function; ligase activity, forming carbon-nitrogen bonds GO:0016881; molecular_function; acid-amino acid ligase activity GO:0019787; molecular_function; ubiquitin-like protein transferase activity GO:0019941; biological_process; modification-dependent protein catabolic process GO:0046872; molecular_function; metal ion binding GO:0051409; biological_process; response to nitrosative stress GO:0070490; biological_process; protein pupylation GO:0071732; biological_process; cellular response to nitric oxide
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0550020.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)