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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0553830

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0553830
Locus	HORVU.MOREX.r2.7HG0553830.1
URL	Gene Ontology GO:0000228 [ Show all 20 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: F-box protein-like GO:0000228; cellular_component; nuclear chromosome GO:0000706; biological_process; meiotic DNA double-strand break processing GO:0000737; biological_process; DNA catabolic process, endonucleolytic GO:0003677; molecular_function; DNA binding GO:0003824; molecular_function; catalytic activity GO:0003918; molecular_function; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005694; cellular_component; chromosome GO:0006259; biological_process; DNA metabolic process GO:0007131; biological_process; reciprocal meiotic recombination GO:0009553; biological_process; embryo sac development GO:0009555; biological_process; pollen development GO:0016787; molecular_function; hydrolase activity GO:0016889; molecular_function; endodeoxyribonuclease activity, producing 3'-phosphomonoesters GO:0042138; biological_process; meiotic DNA double-strand break formation GO:0046872; molecular_function; metal ion binding GO:0048316; biological_process; seed development GO:0051026; biological_process; chiasma assembly GO:0051321; biological_process; meiotic cell cycle
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0553830.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)