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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0609340

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0609340
Locus	HORVU.MOREX.r2.7HG0609340.1
URL	Gene Ontology GO:0001934 [ Show all 39 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 41 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Nuclear transcription factor Y subunit B GO:0001934; biological_process; positive regulation of protein phosphorylation GO:0004623; molecular_function; phospholipase A2 activity GO:0005516; molecular_function; calmodulin binding GO:0005615; cellular_component; extracellular space GO:0005737; cellular_component; cytoplasm GO:0005739; cellular_component; mitochondrion GO:0005815; cellular_component; microtubule organizing center GO:0005829; cellular_component; cytosol GO:0006629; biological_process; lipid metabolic process GO:0006935; biological_process; chemotaxis GO:0007204; biological_process; positive regulation of cytosolic calcium ion concentration GO:0007613; biological_process; memory GO:0008152; biological_process; metabolic process GO:0014832; biological_process; urinary bladder smooth muscle contraction GO:0016020; cellular_component; membrane GO:0016042; biological_process; lipid catabolic process GO:0016787; molecular_function; hydrolase activity GO:0017171; molecular_function; serine hydrolase activity GO:0019731; biological_process; antibacterial humoral response GO:0019901; molecular_function; protein kinase binding GO:0032049; biological_process; cardiolipin biosynthetic process GO:0034976; biological_process; response to endoplasmic reticulum stress GO:0035774; biological_process; positive regulation of insulin secretion involved in cellular response to glucose stimulus GO:0036151; biological_process; phosphatidylcholine acyl-chain remodeling GO:0036152; biological_process; phosphatidylethanolamine acyl-chain remodeling GO:0038096; biological_process; Fc-gamma receptor signaling pathway involved in phagocytosis GO:0043008; molecular_function; ATP-dependent protein binding GO:0045921; biological_process; positive regulation of exocytosis GO:0047499; molecular_function; calcium-independent phospholipase A2 activity GO:0051967; biological_process; negative regulation of synaptic transmission, glutamatergic GO:0060135; biological_process; maternal process involved in female pregnancy GO:0090037; biological_process; positive regulation of protein kinase C signaling GO:0090200; biological_process; positive regulation of release of cytochrome c from mitochondria GO:0090238; biological_process; positive regulation of arachidonic acid secretion GO:0097755; biological_process; positive regulation of blood vessel diameter GO:0102567; molecular_function; phospholipase A2 activity (consuming 1, 2-dipalmitoylphosphatidylcholine) GO:0102568; molecular_function; phospholipase A2 activity consuming 1, 2-dioleoylphosphatidylethanolamine) GO:1901339; biological_process; regulation of store-operated calcium channel activity GO:2000304; biological_process; positive regulation of ceramide biosynthetic process
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0609340.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)