Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.UnG0627350

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.UnG0627350
Locus	HORVU.MOREX.r2.UnG0627350.1
URL	Gene Ontology GO:0002119 [ Show all 20 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Protease inhibitor/seed storage/lipid transfer protein family protein GO:0002119; biological_process; nematode larval development GO:0005886; cellular_component; plasma membrane GO:0007162; biological_process; negative regulation of cell adhesion GO:0007165; biological_process; signal transduction GO:0007275; biological_process; multicellular organism development GO:0007399; biological_process; nervous system development GO:0007413; biological_process; axonal fasciculation GO:0008360; biological_process; regulation of cell shape GO:0009792; biological_process; embryo development ending in birth or egg hatching GO:0009986; cellular_component; cell surface GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0017154; molecular_function; semaphorin receptor activity GO:0030154; biological_process; cell differentiation GO:0031252; cellular_component; cell leading edge GO:0043087; biological_process; regulation of GTPase activity GO:0045138; biological_process; nematode male tail tip morphogenesis GO:0050772; biological_process; positive regulation of axonogenesis GO:0071526; biological_process; semaphorin-plexin signaling pathway GO:1902667; biological_process; regulation of axon guidance
Type	Genomic
Sequence	HORVU.MOREX.r2.UnG0627350.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)