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GrainGenes Probe Report: HORVU.MOREX.r2.UnG0632840

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.UnG0632840
Locus	HORVU.MOREX.r2.UnG0632840.1
URL	Gene Ontology GO:0001941 [ Show all 32 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 34 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: DNA topoisomerase GO:0001941; biological_process; postsynaptic membrane organization GO:0003009; biological_process; skeletal muscle contraction GO:0004888; molecular_function; transmembrane signaling receptor activity GO:0005216; molecular_function; ion channel activity GO:0005230; molecular_function; extracellular ligand-gated ion channel activity GO:0005515; molecular_function; protein binding GO:0005886; cellular_component; plasma membrane GO:0005892; cellular_component; acetylcholine-gated channel complex GO:0006811; biological_process; ion transport GO:0006812; biological_process; cation transport GO:0006936; biological_process; muscle contraction GO:0007165; biological_process; signal transduction GO:0007271; biological_process; synaptic transmission, cholinergic GO:0007274; biological_process; neuromuscular synaptic transmission GO:0015267; molecular_function; channel activity GO:0015276; molecular_function; ligand-gated ion channel activity GO:0015464; molecular_function; acetylcholine receptor activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0022848; molecular_function; acetylcholine-gated cation-selective channel activity GO:0030054; cellular_component; cell junction GO:0034220; biological_process; ion transmembrane transport GO:0035094; biological_process; response to nicotine GO:0035095; biological_process; behavioral response to nicotine GO:0042166; molecular_function; acetylcholine binding GO:0042391; biological_process; regulation of membrane potential GO:0045202; cellular_component; synapse GO:0045211; cellular_component; postsynaptic membrane GO:0048747; biological_process; muscle fiber development GO:0050877; biological_process; nervous system process GO:0060078; biological_process; regulation of postsynaptic membrane potential GO:0060079; biological_process; excitatory postsynaptic potential
Type	Genomic
Sequence	HORVU.MOREX.r2.UnG0632840.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)