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GrainGenes Probe Report: TraesCS1A01G130800

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS1A01G130800
Locus
TraesCS1A01G130800.1
URL
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Pfam PF00076
Pfam PF15519
InterPro IPR000504
InterPro IPR006509
InterPro IPR029123
Gene Ontology GO:0003676
Gene Ontology GO:0003723
Gene Ontology GO:0005634
Gene Ontology GO:0006397
Gene expression at wheat-expression.com (expVIP)
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A072U390|A0A072U390_MEDTR
Human Readable Description: RNA-binding protein, putative
Pfam IDs Description: PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PF15519: linker between RRM2 and RRM3 domains in RBM39 protein
InterPro IDs Description: IPR000504: RNA recognition motif domain; IPR006509: Splicing factor, RBM39-like; IPR029123: Splicing factor RBM39, linker
GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0003723 MF: RNA binding; GO:0005634 CC: nucleus; GO:0006397 BP: mRNA processing
Type
Genomic
Sequence
TraesCS1A01G130800.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring