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GrainGenes Probe Report: TraesCS1A01G179700

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
TraesCS1A01G179700
Locus
TraesCS1A01G179700.1
URL
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Pfam PF00488
InterPro IPR000432
InterPro IPR005747
InterPro IPR007696
InterPro IPR027417
Gene Ontology GO:0004519
Gene Ontology GO:0005524
Gene Ontology GO:0006298
Gene Ontology GO:0016887
Gene Ontology GO:0030983
Gene Ontology GO:0045910
Gene expression at wheat-expression.com (expVIP)
Reference
ReferenceIWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks
BLAST Hit Accession: tr|A0A061G3J4|A0A061G3J4_THECC
Human Readable Description: DNA mismatch repair protein MutS, putative
Pfam IDs Description: PF00488: MutS domain V
InterPro IDs Description: IPR000432: DNA mismatch repair protein MutS, C-terminal; IPR005747: Endonuclease MutS2; IPR007696: DNA mismatch repair protein MutS, core; IPR027417: P-loop containing nucleoside triphosphate hydrolase
GO IDs Description via InterPro: GO:0004519 MF: endonuclease activity; GO:0005524 MF: ATP binding; GO:0006298 BP: mismatch repair; GO:0016887 MF: ATPase activity; GO:0030983 MF: mismatched DNA binding; GO:0045910 BP: negative regulation of DNA recombination
Type
Genomic
Sequence
TraesCS1A01G179700.1
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring